NOT AN OFFER TO INVEST. RED HERRING DISCLOSURE AVAILABLE ON REQUEST. PROFESSIONAL INVESTORS ONLY.

NIH. PUBMED CENTRAL. Classification of Human Viruses

DOWNLOAD PDF FOR EDUCATIONAL PURPOSES

TABLE 201.2

Families of Viruses That Infect Humans

Family Name Derivation of Family Name Genome Segmentation Capsid Morphology Envelope
Adenoviridae Gland dsDNA 1 Icosahedral Naked

Anelloviridae Ring-shaped ssDNA(−)f 1 Icosahedral Naked

Arenaviridae Sand ssRNA(−)g, h 2 Helical Enveloped

Astroviridae Star ssRNA(+)i 1 Icosahedral Naked

Bornaviridaea Location in Germany ssRNA(−)g 1 Helical Enveloped

Bunyaviridae Location in Uganda ssRNA(−)g, h 3 Helical Enveloped

Caliciviridae Cup or chalice ssRNA(+)i 1 Icosahedral Naked

Coronaviridaeb Crown ssRNA(+)i 1 Helical Enveloped

Filoviridaea Thread ssRNA(−)g 1 Helical Enveloped

Flaviviridae Yellow ssRNA(+)i 1 Icosahedral Enveloped

Hepadnaviridae Liver, DNA Partially ssDNA 1 Icosahedral Enveloped

Hepeviridae Hepatitis E ssRNA(+)i 1 Icosahedral Naked

Herpesviridaec Creeping dsDNA 1 Icosahedral Enveloped

Orthomyxoviridae True, slime or mucus ssRNA(−)g 6–8 Helical Enveloped

Papillomaviridae Bumpy, tumor dsDNA 1 Icosahedral Naked

Paramyxoviridaea Alongside, slime or mucus ssRNA(−)g 1 Helical Enveloped

Parvoviridae Little ssDNA 1 Icosahedral Naked

Picobirnaviridae “Little”; “two”, RNA dsRNA 2 Icosahedral Naked

Picobirna Little, two, RNA dsRNA 2 Icosahedral Naked

Picornaviridaed Little, RNA ssRNA(+)i 1 Icosahedral Naked

Pneumoviridae “Lung” ssRNA(−)g 1 Helical Enveloped

Polyomaviridae Many, tumor dsDNA 1 Icosahedral Naked

Poxviridae Pustule dsDNA 1 Complex Varies

Reoviridae Respiratory, enteric, orphan dsRNA 10–12 Icosahedral Naked

Retroviridae Backward ssRNA(+)i 1 but diploid Complex Enveloped

Rhabdoviridaea Rod ssRNA(−)g 1 Helical Enveloped

Togaviridae Cloak ssRNA(+)i 1 Icosahedral Enveloped

Deltae Fourth hepatitis group ssRNA(−)g 1 Icosahedral Enveloped

ds, double stranded; ss, single stranded.

aMononegavirales.
bNidovirales.
cHerpesvirales.
dPicornavirales.
eFloating genus, which is not currently assigned to a viral family. It bears some similarities to viroid pathogens of plants.
fssDNA(+) indicates the mRNA-coding strand.
gssRNA(−) indicates the complement of the message-sense strand.
hSome segments are ambisense.
issRNA(+) indicates a message-sense strand.

Key References

5. Siegel R. Human Virology at Stanford: Humans and Viruses Virus Family List. http://www.stanford.edu/group/virus/viruslist.html
15. Lipkin WI. The changing face of pathogen discovery and surveillance. Nat Rev Microbiol. 2013;11:133–141. [PMC free article] [PubMed] []
16. Ho T, Tzanetakis IE. Development of a virus detection and discovery pipeline using next generation sequencing. Virology. 2014;471-473:54–60. [PubMed] []
21. International Committee on Taxonomy of Viruses Virus Taxonomy Assignments. http://ICTVonline.org/virusTaxInfo.asp

References

1. Murphy FA. Virus taxonomy. In: Knipe DM, Howley PM, editors. Fields Virology. 5th ed. Lippincott-Raven Publishers; Philadelphia: 1996. p. 17. []
2. Condit R. Principles of virology. In: Knipe DM, Howley PM, editors. Fields Virology. 5th ed. Lippincott Williams & Wilkins; Philadelphia: 2007. pp. 25–57. []
3. Fenner F. The classification and nomenclature of viruses: summary of results of meetings of the International Committee on Taxonomy of Viruses in Madrid, September 1975. J Gen Virol. 1976;31:463–470. [PubMed] []
4. Knipe DM, Howley PM, editors. Fields Virology. 5th ed. Lippincott Williams & Wilkins; Philadelphia: 2007. []
5. Siegel R. Human Virology at Stanford: Humans and Viruses Virus Family List. http://www.stanford.edu/group/virus/viruslist.html
6. Delwart EL. Viral metagenomics. Rev Med Virol. 2007;17:115–131. [PMC free article] [PubMed] []
7. Lipkin WI. Microbe hunting in the 21st century. Proc Natl Acad Sci USA. 2009;106:6–7. [PMC free article] [PubMed] []
8. Bernardin F, Operskalski E, Busch M, Delwart E. Transfusion transmission of highly prevalent commensal human viruses. Transfusion. 2010;50:2474–2483. [PubMed] []
9. Emerson SU, Anderson D, Arankalle A. Hepevirus. In: Fauquet CM, Mayo MA, Maniloff J, editors. Virus Taxonomy: VIIIth Report of the ICTV. Elsevier/Academic Press; London: 2004. pp. 851–855. []
10. Fauquet CM, Mayo MA. The 7th ICTV report. Arch Virol. 2001;146:189–194. [PubMed] []
11. Horzinek MV, Flewett TH, Saif LJ. A new family of vertebrate viruses: Toroviridae. Intervirology. 1987;27:17–24. [PubMed] []
12. Cavanagh D, Brian DA, Brinton MA. The Coronaviridae now comprises two genera, coronavirus and torovirus: report of the Coronaviridae Study Group. Adv Exp Med Biol. 1993;342:255–257. [PubMed] []
13. International Committee on Taxonomy of Viruses Alphabetical Listing of Study Groups. http://www.ictvonline.org/studygroups.asp?se=5
14. International Committee on Taxonomy of Viruses Home Page. http://www.ictvonline.org/index.asp
15. Lipkin WI. The changing face of pathogen discovery and surveillance. Nat Rev Microbiol. 2013;11:133–141. [PMC free article] [PubMed] []
16. Ho T, Tzanetakis IE. Development of a virus detection and discovery pipeline using next generation sequencing. Virology. 2014;471-473:54–60. [PubMed] []
17. Faruque SM, Mekalanos JJ. Phage-bacterial interactions in the evolution of toxigenic Vibrio cholerae. Virulence. 2012;7:556–565. [PMC free article] [PubMed] []
18. The International Code of Virus Classification and Nomenclature 2002. http://ictvonline.org/codeofvirusclassification_2002.asp?bhcp=1 August.
19. van Regenmortel MHV, Maniloff J, Calisher CH. The concept of virus species. Arch Virol. 1991;120:313–314. [PubMed] []
20. van Regenmortel MHV. Introduction to the species concept in virus taxonomy. In: van Regenmortel MHV, Fauquet CM, Bishop DHL, editors. Seventh ICTV Report. Academic Press; San Diego: 2000. pp. 3–16. []
21. International Committee on Taxonomy of Viruses Virus Taxonomy Assignments. http://ICTVonline.org/virusTaxInfo.asp
22. Brown BA, Maher K, Flemister MR. Resolving ambiguities in genetic typing of human enterovirus species C clinical isolates and identification of enterovirus 96, 99 and 102. J Gen Virol. 2009;90:1713–1723. [PubMed] []
24. Yip CCY, Lau SKP, Woo PCY. Complete genome sequence of a coxsackievirus A22 strain in Hong Kong reveals a natural intratypic recombination event. J Virol. 2011;85:12098–12099. [PMC free article] [PubMed] []
25. Apparent global interruption of wild poliovirus type 2 transmission. MMWR Morb Mortal Wkly Rep. 2001;50:222–224. [PubMed] []
26. Kew OM, Cochi SL, Jafari HS. Possible eradication of wild poliovirus type 3—worldwide, 2012. MMWR Morb Mortal Wkly Rep. 2014;63:1031–1033. [PMC free article] [PubMed] []
27. Carstens EB. Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2009) Arch Virol. 2010;155:133–146. [PMC free article] [PubMed] []
28. Wong HR, Jiang G, Gangeswaran R. Modification of early gene enhancer-promoter improves the oncolytic potency of adenovirus 11. Mol Ther. 2011;20:306–316. [PMC free article] [PubMed] []
29. ICTV Virus Taxonomy 2015. http://ictvonline.org/virusTaxonomy.asp Release.
30. Fatal illnesses associated with a New World Arenavirus—California, 1999–2000. MMWR Morb Mortal Wkly Rep. 2000;49:709–711. [PubMed] []
31. Delgado S, Erickson BR, Agudo R. Chapare virus, a newly discovered arenavirus isolated from a fatal hemorrhagic fever case in Bolivia. PLoS Pathog. 2008;4:e1000047. [PMC free article] [PubMed] []
32. Lau SK, Lee P, Tsang AK. Molecular epidemiology of human coronavirus OC43 reveals evolution of different genotypes over time and recent emergence of a novel genotype due to natural recombination. J Virol. 2011;85:11325–11337. [PMC free article] [PubMed] []
33. Abdul-Rasool S, Fielding BC. Understanding human coronavirus HCoV-NL63. Open Virol J. 2010;4:76–84. [PMC free article] [PubMed] []
34. Esper F, Weibel C, Ferguson D. Coronavirus HKU1 infection in the United States. Emerg Infect Dis. 2006;12:775–779. [PMC free article] [PubMed] []
35. Feng Y, Zhao W, Feng Y. A novel genotype of GB virus C: its identification and predominance among injecting drug users in Yunnan, China. PLoS ONE. 2011;6:e21151. [PMC free article] [PubMed] []
36. Bussetti AV, Palacios G, Travassos da Rosa A. Genomic and antigenic characterization of Jos virus. J Gen Virol. 2012;93(Pt 2):293–298. [PMC free article] [PubMed] []
37. Chen Z, Schiffman M, Herrero R. Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67. PLoS ONE. 2011;6:e20183. [PMC free article] [PubMed] []
38. Adrian WP, Kirkland PD, Ross AD. An apparently new virus (family Paramyxoviridae) infectious for pigs, humans, and fruit bats. Emerg Infect Dis. 1998;4:269–271. [PMC free article] [PubMed] []
39. Foulongne V, Rodiere M, Segondy M. Human bocavirus in children. Emerg Infect Dis. 2006;12:862–863. [PMC free article] [PubMed] []
41. Holtz L, Finkbeiner S, Kirkwood C, Wang D. Identification of a novel picornavirus related to cosaviruses in a child with acute diarrhea. Virol J. 2008;5:159. [PMC free article] [PubMed] []
42. Chiu CY, Greninger AL, Kanada K. Identification of cardioviruses related to Theiler’s murine encephalomyelitis virus in human infections. Proc Natl Acad Sci USA. 2008;105:14124–14129. [PMC free article] [PubMed] []
43. Greninger AL, Runckel C, Chiu CY. The complete genome of klassevirus: a novel picornavirus in pediatric stool. Virol J. 2009;6:82. [PMC free article] [PubMed] []
44. Feng H, Shuda M, Chang Y, Moore PS. Clonal integration of a polyomavirus in human merkel cell carcinoma. Science. 2008;319:1096–1100. [PMC free article] [PubMed] []
45. Moens U, Ludvigsen M, Van Ghelue M. Human polyomaviruses in skin diseases. Patholog Res Int. 2011;2011:123491. [PMC free article] [PubMed] []
46. Smith GC. Genus Yatapoxvirus. In: Mercer AA, Schmidt A, Weber O, editors. Poxviruses. Birkhäuser Verlag; Basel, Switzerland: 2007. pp. 113–126. []
47. Wolfe ND, Heneine W, Carr JK. Emergence of unique primate T-lymphotropic viruses among central African bushmeat hunters. Proc Natl Acad Sci USA. 2005;102:7994–7999. [PMC free article] [PubMed] []
48. Koppers-Lalic D, Hoeben RC. Non-human viruses developed as therapeutic agent for use in humans. Rev Med Virol. 2011;21:227–239. [PMC free article] [PubMed] []
2023-01-18T09:43:02+00:00
Go to Top